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LOC131545237 tight junction protein ZO-2-like [ Onychostoma macrolepis ]

Gene ID: 131545237, updated on 26-Oct-2023

Summary

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Gene symbol
LOC131545237
Gene description
tight junction protein ZO-2-like
Locus tag
G5714_009494
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostoma macrolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Acrossocheilinae; Onychostoma
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Genomic context

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See LOC131545237 in Genome Data Viewer
Location:
chromosome: 08
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_08 current ASM1243209v1 (GCF_012432095.1) 08 NC_081162.1 (22770576..22878988, complement)

Chromosome 08 - NC_081162.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 81 homolog Neighboring gene formin binding protein 1a Neighboring gene piercer of microtubule wall 1 Neighboring gene phosphatidylinositol-4-phosphate 5-kinase, type I, beta b Neighboring gene frataxin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081162.1 Chromosome 08 Reference ASM1243209v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_012432095.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1243209v1 Primary Assembly

Genomic

  1. NC_081162.1 Reference ASM1243209v1 Primary Assembly

    Range
    22770576..22878988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058783871.1 → XP_058639854.1  tight junction protein ZO-2-like isoform X2

  2. XM_058783874.1 → XP_058639857.1  tight junction protein ZO-2-like isoform X2

  3. XM_058783870.1 → XP_058639853.1  tight junction protein ZO-2-like isoform X1

  4. XM_058783872.1 → XP_058639855.1  tight junction protein ZO-2-like isoform X3

    UniProtKB/TrEMBL
    A0A7J6CX84

  5. XM_058783873.1 → XP_058639856.1  tight junction protein ZO-2-like isoform X4

RNA

  1. XR_009272369.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases