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tmtc2a transmembrane O-mannosyltransferase targeting cadherins 2a [ Onychostoma macrolepis ]

Gene ID: 131539566, updated on 28-Mar-2024

Summary

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Gene symbol
tmtc2a
Gene description
transmembrane O-mannosyltransferase targeting cadherins 2a
Locus tag
G5714_004987
Gene type
protein coding
RefSeq status
MODEL
Organism
Onychostoma macrolepis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Acrossocheilinae; Onychostoma
Orthologs
zebrafish all
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Genomic context

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See tmtc2a in Genome Data Viewer
Location:
chromosome: 04
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_08 current ASM1243209v1 (GCF_012432095.1) 04 NC_081158.1 (28035152..28070254)

Chromosome 04 - NC_081158.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 59 Neighboring gene methyltransferase like 25 Neighboring gene uncharacterized LOC131538533 Neighboring gene uncharacterized LOC131539582 Neighboring gene uncharacterized LOC131539583

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081158.1 Chromosome 04 Reference ASM1243209v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_012432095.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1243209v1 Primary Assembly

Genomic

  1. NC_081158.1 Reference ASM1243209v1 Primary Assembly

    Range
    28035152..28070254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058774201.1 → XP_058630184.1  protein O-mannosyl-transferase TMTC2 isoform X2

  2. XM_058774200.1 → XP_058630183.1  protein O-mannosyl-transferase TMTC2 isoform X1

    UniProtKB/TrEMBL
    A0A7J6D6Z0
Nucleotide Protein
Heading Accession and Version

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