U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

bend5 BEN domain containing 5 [ Solea solea (common sole) ]

Gene ID: 131465498, updated on 28-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
bend5
Gene description
BEN domain containing 5
See related
EnsemblRapid:ENSXQHG00000012073
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea solea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See bend5 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_08 current fSolSol10.1 (GCF_958295425.1) 9 NC_081142.1 (7780863..7795908)

Chromosome 9 - NC_081142.1Genomic Context describing neighboring genes Neighboring gene DMRT-like family A2 Neighboring gene ELAV like neuron-specific RNA binding protein 4 Neighboring gene AGBL carboxypeptidase 4 Neighboring gene spermatogenesis associated 6 Neighboring gene deoxynucleotidyltransferase, terminal, interacting protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_081142.1 Chromosome 9 Reference fSolSol10.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Exploring the larval transcriptome of the common sole (Solea solea L.). Ferraresso S, et al. BMC Genomics, 2013 May 10. PMID 23663263, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
BEN domain-containing protein 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_958295425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSolSol10.1

Genomic

  1. NC_081142.1 Reference fSolSol10.1

    Range
    7780863..7795908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058638218.1 → XP_058494201.1  BEN domain-containing protein 5 isoform X1

    Related
    ENSXQHP00000026296.1, ENSXQHT00000026710.1

  2. XM_058638220.1 → XP_058494203.1  BEN domain-containing protein 5 isoform X2

  3. XM_058638219.1 → XP_058494202.1  BEN domain-containing protein 5 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.