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tnfaip8l3 tumor necrosis factor, alpha-induced protein 8-like 3 [ Solea solea (common sole) ]

Gene ID: 131460028, updated on 28-Mar-2024

Summary

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Gene symbol
tnfaip8l3
Gene description
tumor necrosis factor, alpha-induced protein 8-like 3
See related
EnsemblRapid:ENSXQHG00000018904
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea solea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See tnfaip8l3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_08 current fSolSol10.1 (GCF_958295425.1) 5 NC_081138.1 (27951171..27979369, complement)

Chromosome 5 - NC_081138.1Genomic Context describing neighboring genes Neighboring gene LysM, putative peptidoglycan-binding, domain containing 2 Neighboring gene secretogranin III Neighboring gene aromatase Neighboring gene gliomedin

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081138.1 Chromosome 5 Reference fSolSol10.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Exploring the larval transcriptome of the common sole (Solea solea L.). Ferraresso S, et al. BMC Genomics, 2013 May 10. PMID 23663263, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor alpha-induced protein 8-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_958295425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSolSol10.1

Genomic

  1. NC_081138.1 Reference fSolSol10.1

    Range
    27951171..27979369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058630265.1 → XP_058486248.1  tumor necrosis factor alpha-induced protein 8-like protein 3

    Related
    ENSXQHP00000040996.1, ENSXQHT00000042011.1
Nucleotide Protein
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Gene LinkOut

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