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fads6 fatty acid desaturase 6 [ Solea solea (common sole) ]

Gene ID: 131448486, updated on 28-Mar-2024

Summary

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Gene symbol
fads6
Gene description
fatty acid desaturase 6
See related
EnsemblRapid:ENSXQHG00000016104
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea solea
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
Orthologs
human zebrafish all
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Genomic context

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See fads6 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current fSolSol10.1 (GCF_958295425.1) 21 NC_081154.1 (19394180..19402222)

Chromosome 21 - NC_081154.1Genomic Context describing neighboring genes Neighboring gene proton channel OTOP3-like Neighboring gene pre-mRNA splicing regulator USH1G-like Neighboring gene tripartite motif containing 16 Neighboring gene trans-golgi network vesicle protein 23 homolog B (S. cerevisiae)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_081154.1 Chromosome 21 Reference fSolSol10.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Exploring the larval transcriptome of the common sole (Solea solea L.). Ferraresso S, et al. BMC Genomics, 2013 May 10. PMID 23663263, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid desaturase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_958295425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSolSol10.1

Genomic

  1. NC_081154.1 Reference fSolSol10.1

    Range
    19394180..19402222
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058621007.1 → XP_058476990.1  fatty acid desaturase 6

    Related
    ENSXQHP00000035181.1, ENSXQHT00000035799.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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