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SFTPA1 surfactant protein A1 [ Diceros bicornis minor ]

Gene ID: 131406751, updated on 28-Mar-2024

Summary

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Gene symbol
SFTPA1
Gene description
surfactant protein A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Diceros bicornis minor (sub-species: minor)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Diceros
Orthologs
human all
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Genomic context

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See SFTPA1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_07 current mDicBic1.mat.cur (GCF_020826845.1) 6 NC_080745.1 (5022022..5024277, complement)

Chromosome 6 - NC_080745.1Genomic Context describing neighboring genes Neighboring gene surfactant protein D Neighboring gene mannose-binding protein A-like Neighboring gene methionine adenosyltransferase 1A Neighboring gene DPY30 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080745.1 Chromosome 6 Reference mDicBic1.mat.cur Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pulmonary surfactant-associated protein A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_020826845.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDicBic1.mat.cur Primary Assembly

Genomic

  1. NC_080745.1 Reference mDicBic1.mat.cur Primary Assembly

    Range
    5022022..5024277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058542632.1 → XP_058398615.1  pulmonary surfactant-associated protein A1 isoform X1

  2. XM_058542633.1 → XP_058398616.1  pulmonary surfactant-associated protein A1 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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