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SSBP1 single stranded DNA binding protein 1 [ Hirundo rustica (Barn swallow) ]

Gene ID: 131378543, updated on 3-Aug-2024

Summary

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Gene symbol
SSBP1
Gene description
single stranded DNA binding protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Hirundo rustica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Hirundinidae; Hirundo
Orthologs
human mouse all
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Genomic context

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See SSBP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_07 current bHirRus1.pri.v3 (GCF_015227805.2) 4 NC_053453.1 (64797150..64801751)

Chromosome 4 - NC_053453.1Genomic Context describing neighboring genes Neighboring gene DENN domain containing 11 Neighboring gene WEE2 oocyte meiosis inhibiting kinase Neighboring gene cAMP responsive element binding protein 3 like 2 Neighboring gene diacylglycerol kinase iota

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_053453.1 Chromosome 4 Reference bHirRus1.pri.v3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables single-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial nucleoid IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
single-stranded DNA-binding protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_015227805.2-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bHirRus1.pri.v3

Genomic

  1. NC_053453.1 Reference bHirRus1.pri.v3

    Range
    64797150..64801751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058420401.1 → XP_058276384.1  single-stranded DNA-binding protein, mitochondrial

Nucleotide Protein
Heading Accession and Version

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