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LOC131310290 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [ Rhododendron vialii ]

Gene ID: 131310290, updated on 26-Oct-2023

Summary

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Gene symbol
LOC131310290
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Rhododendron vialii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Ericaceae; Ericoideae; Rhodoreae; Rhododendron
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Genomic context

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See LOC131310290 in Genome Data Viewer
Location:
chromosome: 12a
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM3025357v1 (GCF_030253575.1) 12a NC_080568.1 (6293615..6302399)

Chromosome 12a - NC_080568.1Genomic Context describing neighboring genes Neighboring gene spermidine synthase 1 Neighboring gene serine/arginine-rich splicing factor RSZ21-like Neighboring gene AP-1 complex subunit gamma-2-like Neighboring gene small nucleolar RNA snoR100 Neighboring gene threonine--tRNA ligase, mitochondrial 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080568.1 Chromosome 12a Reference ASM3025357v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030253575.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3025357v1

Genomic

  1. NC_080568.1 Reference ASM3025357v1

    Range
    6293615..6302399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058337229.1 → XP_058193212.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 isoform X2

  2. XM_058337230.1 → XP_058193213.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 isoform X3

  3. XM_058337227.1 → XP_058193210.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 isoform X1

  4. XM_058337228.1 → XP_058193211.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 isoform X1

Nucleotide Protein
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