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LOC131240612 carboxyl-terminal-processing peptidase 2, chloroplastic [ Magnolia sinica ]

Gene ID: 131240612, updated on 2-Nov-2023

Summary

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Gene symbol
LOC131240612
Gene description
carboxyl-terminal-processing peptidase 2, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Magnolia sinica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Magnoliidae; Magnoliales; Magnoliaceae; Magnolia
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Genomic context

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See LOC131240612 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_07 current MsV1 (GCF_029962835.1) 3 NC_080575.1 (107839875..107853362)

Chromosome 3 - NC_080575.1Genomic Context describing neighboring genes Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene large ribosomal subunit protein eL20-like Neighboring gene uncharacterized LOC131240613 Neighboring gene uncharacterized LOC131240614

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080575.1 Chromosome 3 Reference MsV1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxyl-terminal-processing peptidase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029962835.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MsV1

Genomic

  1. NC_080575.1 Reference MsV1

    Range
    107839875..107853362
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058238927.1 → XP_058094910.1  carboxyl-terminal-processing peptidase 2, chloroplastic

RNA

  1. XR_009168828.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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