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CHRNA1 cholinergic receptor nicotinic alpha 1 subunit [ Ahaetulla prasina ]

Gene ID: 131201874, updated on 28-Mar-2024

Summary

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Gene symbol
CHRNA1
Gene description
cholinergic receptor nicotinic alpha 1 subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Ahaetulla prasina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Ahaetuliinae; Ahaetulla
Orthologs
human mouse all
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Genomic context

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See CHRNA1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2864084v1 (GCF_028640845.1) 1 NC_080539.1 (215162649..215201310)

Chromosome 1 - NC_080539.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 2 Neighboring gene chimerin 1 Neighboring gene uncharacterized LOC131201885 Neighboring gene WAS/WASL interacting protein family member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080539.1 Chromosome 1 Reference ASM2864084v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetylcholine receptor subunit alpha
Names
Acetylcholine receptor subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028640845.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2864084v1

Genomic

  1. NC_080539.1 Reference ASM2864084v1

    Range
    215162649..215201310
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058190219.1 → XP_058046202.1  acetylcholine receptor subunit alpha

  2. XM_058190210.1 → XP_058046193.1  acetylcholine receptor subunit alpha

  3. XM_058190227.1 → XP_058046210.1  acetylcholine receptor subunit alpha

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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