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TJP2 tight junction protein 2 [ Ahaetulla prasina ]

Gene ID: 131191015, updated on 28-Mar-2024

Summary

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Gene symbol
TJP2
Gene description
tight junction protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Ahaetulla prasina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Ahaetuliinae; Ahaetulla
Orthologs
human mouse all
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Genomic context

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See TJP2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
27
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2864084v1 (GCF_028640845.1) 2 NC_080540.1 (229642573..229727769)

Chromosome 2 - NC_080540.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase type 1 beta Neighboring gene frataxin Neighboring gene endosomal transmembrane epsin interactor 1 Neighboring gene amyloid beta precursor protein binding family A member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080540.1 Chromosome 2 Reference ASM2864084v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in establishment of endothelial intestinal barrier IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of blood-brain barrier permeability IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tight junction protein ZO-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028640845.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2864084v1

Genomic

  1. NC_080540.1 Reference ASM2864084v1

    Range
    229642573..229727769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058168673.1 → XP_058024656.1  tight junction protein ZO-2 isoform X2

  2. XM_058168676.1 → XP_058024659.1  tight junction protein ZO-2 isoform X2

  3. XM_058168675.1 → XP_058024658.1  tight junction protein ZO-2 isoform X2

  4. XM_058168674.1 → XP_058024657.1  tight junction protein ZO-2 isoform X2

  5. XM_058168672.1 → XP_058024655.1  tight junction protein ZO-2 isoform X1

Nucleotide Protein
Heading Accession and Version

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