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LOC131186500 transforming growth factor beta-2 proprotein-like [ Ahaetulla prasina ]

Gene ID: 131186500, updated on 2-Nov-2023

Summary

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Gene symbol
LOC131186500
Gene description
transforming growth factor beta-2 proprotein-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Ahaetulla prasina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Ahaetuliinae; Ahaetulla
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Genomic context

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See LOC131186500 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2864084v1 (GCF_028640845.1) 17 NC_080555.1 (5155624..5163143)

Chromosome 17 - NC_080555.1Genomic Context describing neighboring genes Neighboring gene tRNA methyltransferase activator subunit 11-2 Neighboring gene estrogen related receptor alpha Neighboring gene uncharacterized LOC131186657 Neighboring gene potassium two pore domain channel subfamily K member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080555.1 Chromosome 17 Reference ASM2864084v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type II transforming growth factor beta receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables type III transforming growth factor beta receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SMAD protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transforming growth factor beta-2 proprotein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028640845.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2864084v1

Genomic

  1. NC_080555.1 Reference ASM2864084v1

    Range
    5155624..5163143
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058160145.1 → XP_058016128.1  transforming growth factor beta-2 proprotein-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases