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PKD1 polycystin 1, transient receptor potential channel interacting [ Ahaetulla prasina ]

Gene ID: 131184958, updated on 28-Mar-2024

Summary

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Gene symbol
PKD1
Gene description
polycystin 1, transient receptor potential channel interacting
Gene type
protein coding
RefSeq status
MODEL
Organism
Ahaetulla prasina
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Ahaetuliinae; Ahaetulla
Orthologs
human mouse all
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Genomic context

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See PKD1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
61
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2864084v1 (GCF_028640845.1) 14 NC_080552.1 (3589696..3820970, complement)

Chromosome 14 - NC_080552.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131184965 Neighboring gene polycystin-1-like Neighboring gene NADH:ubiquinone oxidoreductase subunit AB1 Neighboring gene dynactin subunit 5 Neighboring gene U2 spliceosomal RNA Neighboring gene RAB26, member RAS oncogene family Neighboring gene uncharacterized LOC131185023 Neighboring gene small nucleolar RNA SNORD60

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080552.1 Chromosome 14 Reference ASM2864084v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in kidney development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polycystin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028640845.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2864084v1

Genomic

  1. NC_080552.1 Reference ASM2864084v1

    Range
    3589696..3820970 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058156873.1 → XP_058012856.1  polycystin-1 isoform X2

  2. XM_058156874.1 → XP_058012857.1  polycystin-1 isoform X3

  3. XM_058156872.1 → XP_058012855.1  polycystin-1 isoform X1

  4. XM_058156880.1 → XP_058012863.1  polycystin-1 isoform X8

  5. XM_058156881.1 → XP_058012864.1  polycystin-1 isoform X9

  6. XM_058156882.1 → XP_058012865.1  polycystin-1 isoform X10

  7. XM_058156875.1 → XP_058012858.1  polycystin-1 isoform X4

  8. XM_058156876.1 → XP_058012859.1  polycystin-1 isoform X5

  9. XM_058156878.1 → XP_058012861.1  polycystin-1 isoform X7

  10. XM_058156877.1 → XP_058012860.1  polycystin-1 isoform X6

RNA

  1. XR_009152066.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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