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LOC131166009 polygalacturonate 4-alpha-galacturonosyltransferase [ Malania oleifera ]

Gene ID: 131166009, updated on 2-Nov-2023

Summary

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Gene symbol
LOC131166009
Gene description
polygalacturonate 4-alpha-galacturonosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Malania oleifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Santalales; Ximeniaceae; Malania
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Genomic context

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See LOC131166009 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2987363v1 (GCF_029873635.1) 10 NC_080426.1 (77654870..77669092, complement)

Chromosome 10 - NC_080426.1Genomic Context describing neighboring genes Neighboring gene calcium-dependent lipid-binding protein Neighboring gene UTP:RNA uridylyltransferase 1 Neighboring gene uncharacterized LOC131166739 Neighboring gene uncharacterized LOC131166911

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080426.1 Chromosome 10 Reference ASM2987363v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polygalacturonate 4-alpha-galacturonosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029873635.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2987363v1

Genomic

  1. NC_080426.1 Reference ASM2987363v1

    Range
    77654870..77669092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058124219.1 → XP_057980202.1  polygalacturonate 4-alpha-galacturonosyltransferase isoform X2

  2. XM_058124218.1 → XP_057980201.1  polygalacturonate 4-alpha-galacturonosyltransferase isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases