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LOC131148093 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [ Malania oleifera ]

Gene ID: 131148093, updated on 2-Nov-2023

Summary

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Gene symbol
LOC131148093
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Malania oleifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Santalales; Ximeniaceae; Malania
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Genomic context

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See LOC131148093 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2987363v1 (GCF_029873635.1) 2 NC_080418.1 (54830777..54838008, complement)

Chromosome 2 - NC_080418.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131148203 Neighboring gene uncharacterized LOC131149028 Neighboring gene small nucleolar RNA R71 Neighboring gene probable WRKY transcription factor 65

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080418.1 Chromosome 2 Reference ASM2987363v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029873635.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2987363v1

Genomic

  1. NC_080418.1 Reference ASM2987363v1

    Range
    54830777..54838008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058097827.1 → XP_057953810.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7

RNA

  1. XR_009134978.1 RNA Sequence

  2. XR_009134979.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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