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LOC131146498 probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [ Malania oleifera ]

Gene ID: 131146498, updated on 2-Nov-2023

Summary

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Gene symbol
LOC131146498
Gene description
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Malania oleifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Santalales; Ximeniaceae; Malania
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Genomic context

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See LOC131146498 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2987363v1 (GCF_029873635.1) 13 NC_080429.1 (35704758..35724396)

Chromosome 13 - NC_080429.1Genomic Context describing neighboring genes Neighboring gene 2-hydroxyacyl-CoA lyase Neighboring gene uncharacterized LOC131145799 Neighboring gene uncharacterized LOC131146499 Neighboring gene protein NUCLEAR FUSION DEFECTIVE 2 Neighboring gene phosphatidylinositol N-acetylglucosaminyltransferase subunit C-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080429.1 Chromosome 13 Reference ASM2987363v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029873635.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2987363v1

Genomic

  1. NC_080429.1 Reference ASM2987363v1

    Range
    35704758..35724396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058096130.1 → XP_057952113.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

  2. XM_058096132.1 → XP_057952115.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

  3. XM_058096131.1 → XP_057952114.1  probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9

RNA

  1. XR_009134382.1 RNA Sequence

  2. XR_009134378.1 RNA Sequence

  3. XR_009134379.1 RNA Sequence

  4. XR_009134381.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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