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LOC131145097 carboxyl-terminal-processing peptidase 1, chloroplastic [ Malania oleifera ]

Gene ID: 131145097, updated on 2-Nov-2023

Summary

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Gene symbol
LOC131145097
Gene description
carboxyl-terminal-processing peptidase 1, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Malania oleifera
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Santalales; Ximeniaceae; Malania
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Genomic context

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See LOC131145097 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_07 current ASM2987363v1 (GCF_029873635.1) 12 NC_080428.1 (38934065..38986003, complement)

Chromosome 12 - NC_080428.1Genomic Context describing neighboring genes Neighboring gene cold-regulated 413 inner membrane protein 1, chloroplastic-like Neighboring gene PLASMODESMATA CALLOSE-BINDING PROTEIN 2 Neighboring gene uncharacterized LOC131144377 Neighboring gene protein JINGUBANG-like Neighboring gene uclacyanin 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080428.1 Chromosome 12 Reference ASM2987363v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxyl-terminal-processing peptidase 1, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029873635.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2987363v1

Genomic

  1. NC_080428.1 Reference ASM2987363v1

    Range
    38934065..38986003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058094173.1 → XP_057950156.1  carboxyl-terminal-processing peptidase 1, chloroplastic isoform X1

  2. XM_058094174.1 → XP_057950157.1  carboxyl-terminal-processing peptidase 1, chloroplastic isoform X2

  3. XM_058094175.1 → XP_057950158.1  carboxyl-terminal-processing peptidase 1, chloroplastic isoform X3

Nucleotide Protein
Heading Accession and Version

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