U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PRUNE1 prune exopolyphosphatase 1 [ Hippopotamus amphibius kiboko ]

Gene ID: 130845380, updated on 27-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PRUNE1
Gene description
prune exopolyphosphatase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippopotamus amphibius kiboko (sub-species: kiboko)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Ancodonta; Hippopotamidae; Hippopotamus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PRUNE1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_06 current mHipAmp2.hap2 (GCF_030028045.1) 1 NC_080186.1 (113975574..113994077)

Chromosome 1 - NC_080186.1Genomic Context describing neighboring genes Neighboring gene SET domain bifurcated histone lysine methyltransferase 1 Neighboring gene ceramide synthase 2 Neighboring gene annexin A9 Neighboring gene MINDY lysine 48 deubiquitinase 1 Neighboring gene BCL2 interacting protein like Neighboring gene chromosome 1 C1orf56 homolog

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_080186.1 Chromosome 1 Reference mHipAmp2.hap2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables exopolyphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
exopolyphosphatase PRUNE1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030028045.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mHipAmp2.hap2 Primary Assembly

Genomic

  1. NC_080186.1 Reference mHipAmp2.hap2 Primary Assembly

    Range
    113975574..113994077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057722529.1 → XP_057578512.1  exopolyphosphatase PRUNE1 isoform X2

  2. XM_057722512.1 → XP_057578495.1  exopolyphosphatase PRUNE1 isoform X2

  3. XM_057722522.1 → XP_057578505.1  exopolyphosphatase PRUNE1 isoform X2

  4. XM_057722507.1 → XP_057578490.1  exopolyphosphatase PRUNE1 isoform X1

  5. XM_057722539.1 → XP_057578522.1  exopolyphosphatase PRUNE1 isoform X2

  6. XM_057722547.1 → XP_057578530.1  exopolyphosphatase PRUNE1 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.