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LOC130823712 cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose)-like [ Amaranthus tricolor ]

Gene ID: 130823712, updated on 2-Nov-2023

Summary

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Gene symbol
LOC130823712
Gene description
cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose)-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Amaranthus tricolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Genomic context

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See LOC130823712 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM2621246v1 (GCF_026212465.1) 9 NC_080055.1 (10801148..10819640)

Chromosome 9 - NC_080055.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130823163 Neighboring gene uncharacterized LOC130823165 Neighboring gene uncharacterized LOC130823161 Neighboring gene subtilisin-like protease SBT2.3 Neighboring gene uncharacterized LOC130823714

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080055.1 Chromosome 9 Reference ASM2621246v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose)-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026212465.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2621246v1 Primary Assembly

Genomic

  1. NC_080055.1 Reference ASM2621246v1 Primary Assembly

    Range
    10801148..10819640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057688441.1 → XP_057544424.1  cyanidin 3-O-glucoside 5-O-glucosyltransferase (acyl-glucose)-like

Nucleotide Protein
Heading Accession and Version

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