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LOC130818071 putative beta-glucosidase 41 [ Amaranthus tricolor ]

Gene ID: 130818071, updated on 2-Nov-2023

Summary

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Gene symbol
LOC130818071
Gene description
putative beta-glucosidase 41
Gene type
protein coding
RefSeq status
MODEL
Organism
Amaranthus tricolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Genomic context

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See LOC130818071 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM2621246v1 (GCF_026212465.1) 7 NC_080053.1 (30054919..30062801)

Chromosome 7 - NC_080053.1Genomic Context describing neighboring genes Neighboring gene organic cation/carnitine transporter 4 Neighboring gene uncharacterized LOC130817741 Neighboring gene organelle RRM domain-containing protein 2, mitochondrial Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene mRNA cap guanine-N7 methyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080053.1 Chromosome 7 Reference ASM2621246v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative beta-glucosidase 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026212465.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2621246v1 Primary Assembly

Genomic

  1. NC_080053.1 Reference ASM2621246v1 Primary Assembly

    Range
    30054919..30062801
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057684099.1 → XP_057540082.1  putative beta-glucosidase 41

Nucleotide Protein
Heading Accession and Version

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