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LOC130812772 dihydroneopterin aldolase 2-like [ Amaranthus tricolor ]

Gene ID: 130812772, updated on 2-Nov-2023

Summary

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Gene symbol
LOC130812772
Gene description
dihydroneopterin aldolase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Amaranthus tricolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Genomic context

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See LOC130812772 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM2621246v1 (GCF_026212465.1) 5 NC_080051.1 (10321661..10326303)

Chromosome 5 - NC_080051.1Genomic Context describing neighboring genes Neighboring gene protein STRICTOSIDINE SYNTHASE-LIKE 3-like Neighboring gene protein BOLA4, chloroplastic/mitochondrial Neighboring gene uncharacterized LOC130812773 Neighboring gene uncharacterized LOC130812774

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080051.1 Chromosome 5 Reference ASM2621246v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dihydroneopterin aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in folic acid-containing compound metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dihydroneopterin aldolase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026212465.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2621246v1 Primary Assembly

Genomic

  1. NC_080051.1 Reference ASM2621246v1 Primary Assembly

    Range
    10321661..10326303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057678367.1 → XP_057534350.1  dihydroneopterin aldolase 2-like

  2. XM_057678368.1 → XP_057534351.1  dihydroneopterin aldolase 2-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases