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LOC130809345 beta-glucosidase 40 [ Amaranthus tricolor ]

Gene ID: 130809345, updated on 2-Nov-2023

Summary

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Gene symbol
LOC130809345
Gene description
beta-glucosidase 40
Gene type
protein coding
RefSeq status
MODEL
Organism
Amaranthus tricolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
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Genomic context

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See LOC130809345 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM2621246v1 (GCF_026212465.1) 3 NC_080049.1 (27340259..27351353, complement)

Chromosome 3 - NC_080049.1Genomic Context describing neighboring genes Neighboring gene probable mitochondrial-processing peptidase subunit beta, mitochondrial Neighboring gene expansin-A6-like Neighboring gene uncharacterized LOC130809346 Neighboring gene probable methyltransferase PMT5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080049.1 Chromosome 3 Reference ASM2621246v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-glucosidase 40

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_026212465.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2621246v1 Primary Assembly

Genomic

  1. NC_080049.1 Reference ASM2621246v1 Primary Assembly

    Range
    27340259..27351353 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057675074.1 → XP_057531057.1  beta-glucosidase 40

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases