U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC130801355 hydroxyproline O-galactosyltransferase HPGT1-like [ Amaranthus tricolor ]

Gene ID: 130801355, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC130801355
Gene description
hydroxyproline O-galactosyltransferase HPGT1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Amaranthus tricolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC130801355 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM2621246v1 (GCF_026212465.1) 15 NC_080061.1 (704636..713727)

Chromosome 15 - NC_080061.1Genomic Context describing neighboring genes Neighboring gene 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic Neighboring gene V-type proton ATPase subunit E-like Neighboring gene putative glucose-6-phosphate 1-epimerase Neighboring gene probable inactive receptor kinase At4g23740

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_080061.1 Chromosome 15 Reference ASM2621246v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
hydroxyproline O-galactosyltransferase HPGT1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_026212465.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2621246v1 Primary Assembly

Genomic

  1. NC_080061.1 Reference ASM2621246v1 Primary Assembly

    Range
    704636..713727
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057665198.1 → XP_057521181.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X3

  2. XM_057665197.1 → XP_057521180.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X2

  3. XM_057665196.1 → XP_057521179.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X1

  4. XM_057665199.1 → XP_057521182.1  hydroxyproline O-galactosyltransferase HPGT1-like isoform X4

RNA

  1. XR_009039572.1 RNA Sequence

  2. XR_009039573.1 RNA Sequence

  3. XR_009039571.1 RNA Sequence

  4. XR_009039570.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases