U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC130796001 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [ Actinidia eriantha ]

Gene ID: 130796001, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC130796001
Gene description
1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Actinidia eriantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC130796001 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_06 current MaoHua_MHT (GCF_019202715.1) 16 NC_080148.1 (1079051..1093410, complement)

Chromosome 16 - NC_080148.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130750482 Neighboring gene uncharacterized LOC130796002 Neighboring gene uncharacterized LOC130796531 Neighboring gene FCS-Like Zinc finger 17-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_080148.1 Chromosome 16 Reference MaoHua_MHT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-phosphate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_019202715.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MaoHua_MHT Primary Assembly

Genomic

  1. NC_080148.1 Reference MaoHua_MHT Primary Assembly

    Range
    1079051..1093410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057658275.1 → XP_057514258.1  1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like

  2. XM_057658274.1 → XP_057514257.1  1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases