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LOC130793124 syntaxin-81-like [ Actinidia eriantha ]

Gene ID: 130793124, updated on 2-Nov-2023

Summary

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Gene symbol
LOC130793124
Gene description
syntaxin-81-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Actinidia eriantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC130793124 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_06 current MaoHua_MHT (GCF_019202715.1) 2 NC_080134.1 (3842202..3847644)

Chromosome 2 - NC_080134.1Genomic Context describing neighboring genes Neighboring gene proline transporter 2-like Neighboring gene protein transport protein yos1-like Neighboring gene coronatine-insensitive protein 1-like Neighboring gene uncharacterized LOC130788303

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080134.1 Chromosome 2 Reference MaoHua_MHT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-81-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019202715.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MaoHua_MHT Primary Assembly

Genomic

  1. NC_080134.1 Reference MaoHua_MHT Primary Assembly

    Range
    3842202..3847644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057654780.1 → XP_057510763.1  syntaxin-81-like

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases