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LOC130783040 uncharacterized LOC130783040 [ Actinidia eriantha ]

Gene ID: 130783040, updated on 2-Nov-2023

Summary

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Gene symbol
LOC130783040
Gene description
uncharacterized LOC130783040
Gene type
protein coding
RefSeq status
MODEL
Organism
Actinidia eriantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Genomic context

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See LOC130783040 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_06 current MaoHua_MHT (GCF_019202715.1) 8 NC_080140.1 (9797237..9806632, complement)

Chromosome 8 - NC_080140.1Genomic Context describing neighboring genes Neighboring gene probable voltage-gated potassium channel subunit beta Neighboring gene uncharacterized LOC130782056 Neighboring gene probable voltage-gated potassium channel subunit beta Neighboring gene 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080140.1 Chromosome 8 Reference MaoHua_MHT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signal sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in post-translational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Sec61 translocon complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC130783040

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019202715.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MaoHua_MHT Primary Assembly

Genomic

  1. NC_080140.1 Reference MaoHua_MHT Primary Assembly

    Range
    9797237..9806632 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057642544.1 → XP_057498527.1  uncharacterized protein LOC130783040

  2. XM_057642545.1 → XP_057498528.1  uncharacterized protein LOC130783040

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases