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LOC130772299 ABC transporter C family member 3-like [ Actinidia eriantha ]

Gene ID: 130772299, updated on 2-Nov-2023

Summary

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Gene symbol
LOC130772299
Gene description
ABC transporter C family member 3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Actinidia eriantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Genomic context

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See LOC130772299 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_06 current MaoHua_MHT (GCF_019202715.1) 29 NC_080161.1 (18064098..18102375, complement)

Chromosome 29 - NC_080161.1Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor Y subunit C-3-like Neighboring gene probable aquaporin NIP7-1 Neighboring gene cytochrome P450 71D9-like Neighboring gene serine acetyltransferase 1, chloroplastic-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080161.1 Chromosome 29 Reference MaoHua_MHT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plant-type vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ABC transporter C family member 3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019202715.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MaoHua_MHT Primary Assembly

Genomic

  1. NC_080161.1 Reference MaoHua_MHT Primary Assembly

    Range
    18064098..18102375 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057630042.1 → XP_057486025.1  ABC transporter C family member 3-like isoform X3

  2. XM_057630040.1 → XP_057486023.1  ABC transporter C family member 3-like isoform X1

  3. XM_057630041.1 → XP_057486024.1  ABC transporter C family member 3-like isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases