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LOC130769039 glutamine--tRNA ligase-like [ Actinidia eriantha ]

Gene ID: 130769039, updated on 2-Nov-2023

Summary

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Gene symbol
LOC130769039
Gene description
glutamine--tRNA ligase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Actinidia eriantha
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Genomic context

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See LOC130769039 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_06 current MaoHua_MHT (GCF_019202715.1) 27 NC_080159.1 (11134380..11158640)

Chromosome 27 - NC_080159.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130768864 Neighboring gene uncharacterized LOC130768865 Neighboring gene uncharacterized LOC130769041 Neighboring gene MYB-like transcription factor EOBI Neighboring gene uncharacterized LOC130768390

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_080159.1 Chromosome 27 Reference MaoHua_MHT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutaminyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamine--tRNA ligase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_019202715.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MaoHua_MHT Primary Assembly

Genomic

  1. NC_080159.1 Reference MaoHua_MHT Primary Assembly

    Range
    11134380..11158640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057626164.1 → XP_057482147.1  glutamine--tRNA ligase-like isoform X1

  2. XM_057626165.1 → XP_057482148.1  glutamine--tRNA ligase-like isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases