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LOC130641685 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [ Hydractinia symbiolongicarpus ]

Gene ID: 130641685, updated on 9-Nov-2023

Summary

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Gene symbol
LOC130641685
Gene description
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
See related
EnsemblRapid:LOC130641685
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydractinia symbiolongicarpus
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Filifera; Hydractiniidae; Hydractinia
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Genomic context

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See LOC130641685 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_06 current HSymV2.1 (GCF_029227915.1) 4 NC_079878.1 (19523787..19528108)

Chromosome 4 - NC_079878.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130642303 Neighboring gene cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2-like Neighboring gene microspherule protein 1-like Neighboring gene protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like Neighboring gene high mobility group protein 20A-like Neighboring gene glucose-6-phosphate exchanger SLC37A2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079878.1 Chromosome 4 Reference HSymV2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential gene expression between functionally specialized polyps of the colonial hydrozoan Hydractinia symbiolongicarpus (Phylum Cnidaria). Sanders SM, et al. BMC Genomics, 2014 May 28. PMID 24884766, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029227915.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSymV2.1

Genomic

  1. NC_079878.1 Reference HSymV2.1

    Range
    19523787..19528108
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057448597.1 → XP_057304580.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

    Related
    XP_057304580.1, XM_057448597.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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