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LOC130631987 anoctamin-7-like [ Hydractinia symbiolongicarpus ]

Gene ID: 130631987, updated on 9-Nov-2023

Summary

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Gene symbol
LOC130631987
Gene description
anoctamin-7-like
See related
EnsemblRapid:LOC130631987
Gene type
protein coding
RefSeq status
MODEL
Organism
Hydractinia symbiolongicarpus
Lineage
Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Filifera; Hydractiniidae; Hydractinia
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Genomic context

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See LOC130631987 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_06 current HSymV2.1 (GCF_029227915.1) 1 NC_079875.1 (4414418..4421364)

Chromosome 1 - NC_079875.1Genomic Context describing neighboring genes Neighboring gene SHC-transforming protein 1-like Neighboring gene dual specificity mitogen-activated protein kinase kinase 1-like Neighboring gene uncharacterized LOC130632051 Neighboring gene uncharacterized LOC130632030

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079875.1 Chromosome 1 Reference HSymV2.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Venom system variation and the division of labor in the colonial hydrozoan Hydractinia symbiolongicarpus. Klompen AML, et al. Toxicon X, 2022 Jun. PMID 35287376, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chloride channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chloride transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anoctamin-7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029227915.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HSymV2.1

Genomic

  1. NC_079875.1 Reference HSymV2.1

    Range
    4414418..4421364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057444442.1 → XP_057300425.1  anoctamin-7-like isoform X2

    Related
    XP_057300425.1, XM_057444442.1

  2. XM_057444441.1 → XP_057300424.1  anoctamin-7-like isoform X1

    Related
    XP_057300424.1, XM_057444441.1
Nucleotide Protein Strain
Heading Accession and Version

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