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SMPD2 sphingomyelin phosphodiesterase 2 [ Malurus melanocephalus (red-backed fairy wren) ]

Gene ID: 130582628, updated on 3-Aug-2024

Summary

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Gene symbol
SMPD2
Gene description
sphingomyelin phosphodiesterase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Malurus melanocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Maluridae; Malurus
Orthologs
human mouse all
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Genomic context

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See SMPD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_06 current MMel_1.1 (GCF_030028575.1) Unplaced Scaffold NW_026623743.1 (41922..46055)

NW_026623743.1Genomic Context describing neighboring genes Neighboring gene TUB like protein 1 Neighboring gene TEA domain transcription factor 3 Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 1 Neighboring gene inositol 1,4,5-triphosphate receptor associated 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026623743 Unplaced Scaffold Reference MMel_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin phosphodiesterase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030028575.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MMel_1.1 Primary Assembly

Genomic

  1. NW_026623743.1 Reference MMel_1.1 Primary Assembly

    Range
    41922..46055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057381453.1 → XP_057237436.1  sphingomyelin phosphodiesterase 2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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