U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SLC5A1 solute carrier family 5 member 1 [ Malurus melanocephalus (red-backed fairy wren) ]

Gene ID: 130578047, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
SLC5A1
Gene description
solute carrier family 5 member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Malurus melanocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Maluridae; Malurus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SLC5A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_06 current MMel_1.1 (GCF_030028575.1) Unplaced Scaffold NW_026623440.1 (816929..843495, complement)

NW_026623440.1Genomic Context describing neighboring genes Neighboring gene RAB36, member RAS oncogene family Neighboring gene radial spoke head 14 homolog Neighboring gene G protein subunit alpha z Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta Neighboring gene anomalous homeobox

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_026623440 Unplaced Scaffold Reference MMel_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-glucose:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sodium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
sodium/glucose cotransporter 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030028575.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MMel_1.1 Primary Assembly

Genomic

  1. NW_026623440.1 Reference MMel_1.1 Primary Assembly

    Range
    816929..843495 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057373854.1 → XP_057229837.1  sodium/glucose cotransporter 1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.