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ACO1 aconitase 1 [ Malurus melanocephalus (red-backed fairy wren) ]

Gene ID: 130577579, updated on 3-Aug-2024

Summary

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Gene symbol
ACO1
Gene description
aconitase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Malurus melanocephalus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Meliphagoidea; Maluridae; Malurus
Orthologs
human mouse all
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Genomic context

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See ACO1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_06 current MMel_1.1 (GCF_030028575.1) Unplaced Scaffold NW_026623416.1 (648492..684342)

NW_026623416.1Genomic Context describing neighboring genes Neighboring gene tudor domain containing 7 Neighboring gene diacylglycerol kinase theta Neighboring gene uncharacterized LOC130577598 Neighboring gene RNA sensor RIG-I

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026623416 Unplaced Scaffold Reference MMel_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron-responsive element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in citrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic aconitate hydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030028575.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MMel_1.1 Primary Assembly

Genomic

  1. NW_026623416.1 Reference MMel_1.1 Primary Assembly

    Range
    648492..684342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057373055.1 → XP_057229038.1  cytoplasmic aconitate hydratase

  2. XM_057373054.1 → XP_057229037.1  cytoplasmic aconitate hydratase

  3. XM_057373056.1 → XP_057229039.1  cytoplasmic aconitate hydratase

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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