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hcfc1b host cell factor C1b [ Triplophysa rosa ]

Gene ID: 130568077, updated on 10-Jul-2024

Summary

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Gene symbol
hcfc1b
Gene description
host cell factor C1b
Locus tag
IRJ41_021198
See related
EnsemblRapid:ENSTRSG00005008793
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
zebrafish all
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Genomic context

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See hcfc1b in Genome Data Viewer
Location:
chromosome: LG17
Exon count:
27
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG17 NC_079906.1 (20915738..20933607)

Linkage Group LG17 - NC_079906.1Genomic Context describing neighboring genes Neighboring gene methyl CpG binding protein 2 Neighboring gene interleukin-1 receptor-associated kinase 1 Neighboring gene cyclin dependent kinase 20 Neighboring gene GATA binding protein 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079906.1 Chromosome LG17 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone methyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
host cell factor 1b
Names
host cell factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079906.1 Reference Trosa_1v2 Primary Assembly

    Range
    20915738..20933607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057356723.1 → XP_057212706.1  host cell factor 1b

    UniProtKB/TrEMBL
    A0A9W7WG72
    Related
    ENSTRSP00005022811.1, ENSTRST00005023445.1
Nucleotide Protein
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Molecular Biology Databases