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LOC130568043 phospholipid phosphatase 1 [ Triplophysa rosa ]

Gene ID: 130568043, updated on 10-Jul-2024

Summary

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Gene symbol
LOC130568043
Gene description
phospholipid phosphatase 1
Locus tag
IRJ41_024275
See related
EnsemblRapid:ENSTRSG00005004583
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
zebrafish all
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Genomic context

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See LOC130568043 in Genome Data Viewer
Location:
chromosome: LG17
Exon count:
6
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG17 NC_079906.1 (23252373..23256123, complement)

Linkage Group LG17 - NC_079906.1Genomic Context describing neighboring genes Neighboring gene lipoxygenase homology PLAT domains 1b Neighboring gene arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2Cb Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 1b Neighboring gene spindlin b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079906.1 Chromosome LG17 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 1
Names
putative lipid phosphate phosphohydrolase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079906.1 Reference Trosa_1v2 Primary Assembly

    Range
    23252373..23256123 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057356671.1 → XP_057212654.1  phospholipid phosphatase 1

    Related
    ENSTRSP00005010401.1, ENSTRST00005010904.1
Nucleotide Protein
Heading Accession and Version

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