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zgc:154054 Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like [ Triplophysa rosa ]

Gene ID: 130564113, updated on 10-Jul-2024

Summary

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Gene symbol
zgc:154054
Gene description
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like
Locus tag
IRJ41_017591
See related
EnsemblRapid:ENSTRSG00005019176
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
zebrafish all
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Genomic context

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See zgc:154054 in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
15
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG13 NC_079902.1 (19157620..19171474)

Linkage Group LG13 - NC_079902.1Genomic Context describing neighboring genes Neighboring gene matrix metallopeptidase 17b Neighboring gene saxitoxin and tetrodotoxin-binding protein 2 Neighboring gene zinc finger protein 436 Neighboring gene short coiled-coil protein b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079902.1 Chromosome LG13 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi stack IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079902.1 Reference Trosa_1v2 Primary Assembly

    Range
    19157620..19171474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057350002.1 → XP_057205985.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B-like

    Related
    ENSTRSP00005051311.1, ENSTRST00005053571.1
Nucleotide Protein
Heading Accession and Version

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