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abhd16a abhydrolase domain containing 16A, phospholipase [ Triplophysa rosa ]

Gene ID: 130558458, updated on 18-Sep-2024

Summary

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Gene symbol
abhd16a
Gene description
abhydrolase domain containing 16A, phospholipase
Locus tag
IRJ41_012744
See related
EnsemblRapid:ENSTRSG00005013823
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
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Genomic context

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See abhd16a in Genome Data Viewer
Location:
chromosome: LG8
Exon count:
20
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG8 NC_079897.1 (18717937..18727492)

Linkage Group LG8 - NC_079897.1Genomic Context describing neighboring genes Neighboring gene nectin-2 Neighboring gene g6f-like Neighboring gene uncharacterized LOC130558460 Neighboring gene valyl-tRNA synthetase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079897.1 Chromosome LG8 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoacylglycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylserine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylserine lipase ABHD16A
Names
abhydrolase domain-containing protein 16A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079897.1 Reference Trosa_1v2 Primary Assembly

    Range
    18717937..18727492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057340862.1 → XP_057196845.1  phosphatidylserine lipase ABHD16A

    Related
    ENSTRSP00005037166.1, ENSTRST00005038291.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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