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LOC130556098 diacylglycerol kinase beta [ Triplophysa rosa ]

Gene ID: 130556098, updated on 18-Sep-2024

Summary

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Gene symbol
LOC130556098
Gene description
diacylglycerol kinase beta
Locus tag
IRJ41_000116
See related
EnsemblRapid:ENSTRSG00005003120
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
zebrafish all
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Genomic context

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See LOC130556098 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
30
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG6 NC_079895.1 (15447835..15633415, complement)

Linkage Group LG6 - NC_079895.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 44 Neighboring gene ETS variant transcription factor 5a Neighboring gene crystallin, gamma S3 Neighboring gene G2/M phase-specific E3 ubiquitin-protein ligase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079895.1 Chromosome LG6 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diacylglycerol kinase beta
Names
putative diacylglycerol kinase beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079895.1 Reference Trosa_1v2 Primary Assembly

    Range
    15447835..15633415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057336793.1 → XP_057192776.1  diacylglycerol kinase beta isoform X2

    Related
    ENSTRSP00005010300.1, ENSTRST00005010802.1

  2. XM_057336794.1 → XP_057192777.1  diacylglycerol kinase beta isoform X1

    Related
    ENSTRSP00005010301.1, ENSTRST00005010803.1

  3. XM_057336795.1 → XP_057192778.1  diacylglycerol kinase beta isoform X3

    Related
    ENSTRSP00005010302.1, ENSTRST00005010804.1

  4. XM_057336796.1 → XP_057192779.1  diacylglycerol kinase beta isoform X4

    Related
    ENSTRSP00005010303.1, ENSTRST00005010805.1

  5. XM_057336792.1 → XP_057192775.1  diacylglycerol kinase beta isoform X1

  6. XM_057336797.1 → XP_057192780.1  diacylglycerol kinase beta isoform X5

Nucleotide Protein
Heading Accession and Version

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