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lpin2 lipin 2 [ Triplophysa rosa ]

Gene ID: 130555130, updated on 10-Jul-2024

Summary

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Gene symbol
lpin2
Gene description
lipin 2
Locus tag
IRJ41_016323
See related
EnsemblRapid:ENSTRSG00005023375
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
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Genomic context

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See lpin2 in Genome Data Viewer
Location:
chromosome: LG5
Exon count:
24
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG5 NC_079894.1 (6389734..6413492, complement)

Linkage Group LG5 - NC_079894.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130554740 Neighboring gene elastin microfibril interfacer 2a Neighboring gene myomesin 1a (skelemin) Neighboring gene myosin, light chain 12, genome duplicate 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079894.1 Chromosome LG5 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN2
Names
putative phosphatidate phosphatase LPIN2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079894.1 Reference Trosa_1v2 Primary Assembly

    Range
    6389734..6413492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057335213.1 → XP_057191196.1  phosphatidate phosphatase LPIN2 isoform X3

  2. XM_057335212.1 → XP_057191195.1  phosphatidate phosphatase LPIN2 isoform X3

    Related
    ENSTRSP00005060902.1, ENSTRST00005064860.1

  3. XM_057335211.1 → XP_057191194.1  phosphatidate phosphatase LPIN2 isoform X2

    Related
    ENSTRSP00005060842.1, ENSTRST00005064800.1

  4. XM_057335210.1 → XP_057191193.1  phosphatidate phosphatase LPIN2 isoform X1

  5. XM_057335214.1 → XP_057191197.1  phosphatidate phosphatase LPIN2 isoform X4

Nucleotide Protein
Heading Accession and Version

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