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LOC130550131 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like [ Triplophysa rosa ]

Gene ID: 130550131, updated on 10-Jul-2024

Summary

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Gene symbol
LOC130550131
Gene description
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
Locus tag
IRJ41_023282
See related
EnsemblRapid:ENSTRSG00005007199
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
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Genomic context

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See LOC130550131 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
8
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG2 NC_079891.1 (27291492..27301918)

Linkage Group LG2 - NC_079891.1Genomic Context describing neighboring genes Neighboring gene excision repair cross-complementation group 6-like Neighboring gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1a Neighboring gene histo-blood group ABO system transferase 2-like Neighboring gene oncostatin M receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079891.1 Chromosome LG2 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like
Names
3-N-acetylgalactosaminyltransferase 1
like 4
putative globoside alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079891.1 Reference Trosa_1v2 Primary Assembly

    Range
    27291492..27301918
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057327513.1 → XP_057183496.1  globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like

    Related
    ENSTRSP00005018000.1, ENSTRST00005018608.1
Nucleotide Protein
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Molecular Biology Databases