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plpp2b phospholipid phosphatase 2b [ Triplophysa rosa ]

Gene ID: 130549252, updated on 10-Jul-2024

Summary

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Gene symbol
plpp2b
Gene description
phospholipid phosphatase 2b
Locus tag
IRJ41_018745
See related
EnsemblRapid:ENSTRSG00005012477
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
zebrafish all
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Genomic context

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See plpp2b in Genome Data Viewer
Location:
chromosome: LG25
Exon count:
6
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG25 NC_079914.1 (8511396..8525851, complement)

Linkage Group LG25 - NC_079914.1Genomic Context describing neighboring genes Neighboring gene TLE family member 2, transcriptional corepressor a Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene mesoderm induction early response 1, family member 2 Neighboring gene Src homology 2 domain containing transforming protein D, b Neighboring gene sphingosine-1-phosphate receptor 3a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079914.1 Chromosome LG25 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 2b
Names
putative lipid phosphate phosphohydrolase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079914.1 Reference Trosa_1v2 Primary Assembly

    Range
    8511396..8525851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057326471.1 → XP_057182454.1  phospholipid phosphatase 2b

    UniProtKB/TrEMBL
    A0A9W7T6D0
    Related
    ENSTRSP00005032793.1, ENSTRST00005033789.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases