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LOC130548348 lipoprotein lipase [ Triplophysa rosa ]

Gene ID: 130548348, updated on 10-Jul-2024

Summary

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Gene symbol
LOC130548348
Gene description
lipoprotein lipase
Locus tag
IRJ41_003053
See related
EnsemblRapid:ENSTRSG00005013076
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
zebrafish all
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Genomic context

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See LOC130548348 in Genome Data Viewer
Location:
chromosome: LG25
Exon count:
10
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG25 NC_079914.1 (10378497..10382514)

Linkage Group LG25 - NC_079914.1Genomic Context describing neighboring genes Neighboring gene tropomyosin 4a Neighboring gene disintegrin and metalloproteinase domain-containing protein 10 Neighboring gene lipoprotein lipase a Neighboring gene scaffold attachment factor B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079914.1 Chromosome LG25 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables apolipoprotein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipoprotein lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lipoprotein lipase
Names
putative lipoprotein lipase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079914.1 Reference Trosa_1v2 Primary Assembly

    Range
    10378497..10382514
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057325056.1 → XP_057181039.1  lipoprotein lipase

    Related
    ENSTRSP00005034527.1, ENSTRST00005035645.1
Nucleotide Protein
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Gene LinkOut

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