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lama1 laminin, alpha 1 [ Triplophysa rosa ]

Gene ID: 130546782, updated on 10-Jul-2024

Summary

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Gene symbol
lama1
Gene description
laminin, alpha 1
Locus tag
IRJ41_000642
See related
EnsemblRapid:ENSTRSG00005012491
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
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Genomic context

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See lama1 in Genome Data Viewer
Location:
chromosome: LG23
Exon count:
63
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG23 NC_079912.1 (190745..225097, complement)

Linkage Group LG23 - NC_079912.1Genomic Context describing neighboring genes Neighboring gene lethal(3)malignant brain tumor-like protein 4 Neighboring gene Rho GTPase activating protein 28 Neighboring gene leucine rich repeat containing 30a Neighboring gene protein tyrosine phosphatase receptor type Ma

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079912.1 Chromosome LG23 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix structural constituent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in blood vessel morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in camera-type eye development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of embryonic development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laminin subunit alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079912.1 Reference Trosa_1v2 Primary Assembly

    Range
    190745..225097 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057322222.1 → XP_057178205.1  laminin subunit alpha-1

    UniProtKB/TrEMBL
    A0A9W7T7R0
    Related
    ENSTRSP00005033131.1, ENSTRST00005034129.1
Nucleotide Protein
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