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plpp5 phospholipid phosphatase 5 [ Triplophysa rosa ]

Gene ID: 130546555, updated on 10-Jul-2024

Summary

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Gene symbol
plpp5
Gene description
phospholipid phosphatase 5
Locus tag
IRJ41_013567
See related
EnsemblRapid:ENSTRSG00005016369
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
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Genomic context

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See plpp5 in Genome Data Viewer
Location:
chromosome: LG22
Exon count:
8
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG22 NC_079911.1 (9035554..9041015, complement)

Linkage Group LG22 - NC_079911.1Genomic Context describing neighboring genes Neighboring gene transforming, acidic coiled-coil containing protein 1 Neighboring gene DDHD domain containing 2 Neighboring gene nuclear receptor binding SET domain protein 3 Neighboring gene leucine zipper-EF-hand containing transmembrane protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079911.1 Chromosome LG22 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 5
Names
phosphatidate phosphatase PPAPDC1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079911.1 Reference Trosa_1v2 Primary Assembly

    Range
    9035554..9041015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057321891.1 → XP_057177874.1  phospholipid phosphatase 5 isoform X1

    Related
    ENSTRSP00005043946.1, ENSTRST00005045432.1

  2. XM_057321892.1 → XP_057177875.1  phospholipid phosphatase 5 isoform X2

  3. XM_057321893.1 → XP_057177876.1  phospholipid phosphatase 5 isoform X3

    Related
    ENSTRSP00005043944.1, ENSTRST00005045430.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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