U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kirrel3a kirre like nephrin family adhesion molecule 3a [ Triplophysa rosa ]

Gene ID: 130546511, updated on 10-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
kirrel3a
Gene description
kirre like nephrin family adhesion molecule 3a
Locus tag
IRJ41_025168
See related
EnsemblRapid:ENSTRSG00005012397
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See kirrel3a in Genome Data Viewer
Location:
chromosome: LG22
Exon count:
17
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG22 NC_079911.1 (16988202..17099842)

Linkage Group LG22 - NC_079911.1Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 1b Neighboring gene somatolactin beta Neighboring gene CXADR-like membrane protein Neighboring gene small fragment nuclease

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_079911.1 Chromosome LG22 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
kin of IRRE-like protein 3
Names
putative kin of IRRE-like protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079911.1 Reference Trosa_1v2 Primary Assembly

    Range
    16988202..17099842
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057321813.1 → XP_057177796.1  kin of IRRE-like protein 3 isoform X3

    Related
    ENSTRSP00005033141.1, ENSTRST00005034139.1

  2. XM_057321812.1 → XP_057177795.1  kin of IRRE-like protein 3 isoform X2

    Related
    ENSTRSP00005033126.1, ENSTRST00005034124.1

  3. XM_057321811.1 → XP_057177794.1  kin of IRRE-like protein 3 isoform X1

    Related
    ENSTRSP00005033138.1, ENSTRST00005034136.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases