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plpp1a phospholipid phosphatase 1a [ Triplophysa rosa ]

Gene ID: 130545771, updated on 10-Jul-2024

Summary

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Gene symbol
plpp1a
Gene description
phospholipid phosphatase 1a
Locus tag
IRJ41_016149
See related
EnsemblRapid:ENSTRSG00005019659
Gene type
protein coding
RefSeq status
MODEL
Organism
Triplophysa rosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Nemacheilidae; Triplophysa
Orthologs
human zebrafish all
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Genomic context

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See plpp1a in Genome Data Viewer
Location:
chromosome: LG22
Exon count:
7
Annotation release Status Assembly LG Location
RS_2023_06 current Trosa_1v2 (GCF_024868665.1) LG22 NC_079911.1 (6984542..6998908)

Linkage Group LG22 - NC_079911.1Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 1a Neighboring gene hydrogen voltage-gated channel 1 Neighboring gene Mtr4 exosome RNA helicase Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 29 Neighboring gene multiciliate differentiation and DNA synthesis associated cell cycle protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079911.1 Chromosome LG22 Reference Trosa_1v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 1
Names
putative lipid phosphate phosphohydrolase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024868665.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Trosa_1v2 Primary Assembly

Genomic

  1. NC_079911.1 Reference Trosa_1v2 Primary Assembly

    Range
    6984542..6998908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057320510.1 → XP_057176493.1  phospholipid phosphatase 1 isoform X1

    UniProtKB/TrEMBL
    A0A9W7TC31
    Related
    ENSTRSP00005052358.1, ENSTRST00005054831.1

  2. XM_057320511.1 → XP_057176494.1  phospholipid phosphatase 1 isoform X2

    Related
    ENSTRSP00005052359.1, ENSTRST00005054832.1
Nucleotide Protein
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Molecular Biology Databases