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LOC130532694 plectin-like [ Takifugu flavidus (sansaifugu) ]

Gene ID: 130532694, updated on 29-Nov-2023

Summary

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Gene symbol
LOC130532694
Gene description
plectin-like
Locus tag
D4764_10G0006240
See related
EnsemblRapid:ENSTFLG00005022224
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu flavidus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
Plectin
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Genomic context

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See LOC130532694 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
44
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM371156v2 (GCF_003711565.1) 10 NC_079529.1 (7942575..8018158, complement)

Chromosome 10 - NC_079529.1Genomic Context describing neighboring genes Neighboring gene riboflavin transporter 2-like Neighboring gene microtubule actin crosslinking factor 1b Neighboring gene microtubule-actin cross-linking factor 1-like Neighboring gene uncharacterized LOC130532434 Neighboring gene hepcidin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079529.1 Chromosome 10 Reference ASM371156v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_003711565.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM371156v2 Primary Assembly

Genomic

  1. NC_079529.1 Reference ASM371156v2 Primary Assembly

    Range
    7942575..8018158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057045478.1 → XP_056901458.1  plectin-like isoform X19

  2. XM_057045484.1 → XP_056901464.1  plectin-like isoform X25

  3. XM_057045474.1 → XP_056901454.1  plectin-like isoform X16

  4. XM_057045487.1 → XP_056901467.1  plectin-like isoform X28

  5. XM_057045494.1 → XP_056901474.1  plectin-like isoform X35

  6. XM_057045490.1 → XP_056901470.1  plectin-like isoform X31

  7. XM_057045488.1 → XP_056901468.1  plectin-like isoform X29

  8. XM_057045485.1 → XP_056901465.1  plectin-like isoform X26

  9. XM_057045480.1 → XP_056901460.1  plectin-like isoform X21

  10. XM_057045468.1 → XP_056901448.1  plectin-like isoform X11

    Related
    ENSTFLP00005046206.1, ENSTFLT00005048598.1

  11. XM_057045467.1 → XP_056901447.1  plectin-like isoform X10

  12. XM_057045465.1 → XP_056901445.1  plectin-like isoform X8

  13. XM_057045460.1 → XP_056901440.1  plectin-like isoform X3

  14. XM_057045464.1 → XP_056901444.1  plectin-like isoform X7

  15. XM_057045466.1 → XP_056901446.1  plectin-like isoform X9

  16. XM_057045463.1 → XP_056901443.1  plectin-like isoform X6

  17. XM_057045462.1 → XP_056901442.1  plectin-like isoform X5

  18. XM_057045459.1 → XP_056901439.1  plectin-like isoform X2

  19. XM_057045461.1 → XP_056901441.1  plectin-like isoform X4

  20. XM_057045458.1 → XP_056901438.1  plectin-like isoform X1

  21. XM_057045497.1 → XP_056901477.1  plectin-like isoform X38

  22. XM_057045496.1 → XP_056901476.1  plectin-like isoform X37

    Related
    ENSTFLP00005046195.1, ENSTFLT00005048586.1

  23. XM_057045493.1 → XP_056901473.1  plectin-like isoform X34

  24. XM_057045495.1 → XP_056901475.1  plectin-like isoform X36

  25. XM_057045491.1 → XP_056901471.1  plectin-like isoform X32

  26. XM_057045475.1 → XP_056901455.1  plectin-like isoform X17

  27. XM_057045472.1 → XP_056901452.1  plectin-like isoform X14

  28. XM_057045486.1 → XP_056901466.1  plectin-like isoform X27

  29. XM_057045477.1 → XP_056901457.1  plectin-like isoform X18

  30. XM_057045473.1 → XP_056901453.1  plectin-like isoform X15

  31. XM_057045492.1 → XP_056901472.1  plectin-like isoform X33

    Related
    ENSTFLP00005046209.1, ENSTFLT00005048601.1

  32. XM_057045479.1 → XP_056901459.1  plectin-like isoform X20

  33. XM_057045471.1 → XP_056901451.1  plectin-like isoform X13

  34. XM_057045469.1 → XP_056901449.1  plectin-like isoform X12

  35. XM_057045483.1 → XP_056901463.1  plectin-like isoform X24

  36. XM_057045482.1 → XP_056901462.1  plectin-like isoform X23

  37. XM_057045481.1 → XP_056901461.1  plectin-like isoform X22

  38. XM_057045489.1 → XP_056901469.1  plectin-like isoform X30

Nucleotide Protein
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