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tlr18 toll-like receptor 18 [ Takifugu flavidus (sansaifugu) ]

Gene ID: 130532143, updated on 27-Mar-2024

Summary

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Gene symbol
tlr18
Gene description
toll-like receptor 18
Locus tag
D4764_10G0008010
See related
EnsemblRapid:ENSTFLG00005013914
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu flavidus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
zebrafish all
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Genomic context

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See tlr18 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM371156v2 (GCF_003711565.1) 10 NC_079529.1 (10637243..10647906)

Chromosome 10 - NC_079529.1Genomic Context describing neighboring genes Neighboring gene tropomodulin 4 (muscle) Neighboring gene uncharacterized LOC130532146 Neighboring gene leucine rich repeat and Ig domain containing 4b Neighboring gene S100 calcium binding protein A1 Neighboring gene PR domain containing 1a, with ZNF domain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079529.1 Chromosome 10 Reference ASM371156v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in toll-like receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
toll-like receptor 18
Names
Toll-like receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_003711565.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM371156v2 Primary Assembly

Genomic

  1. NC_079529.1 Reference ASM371156v2 Primary Assembly

    Range
    10637243..10647906
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057044516.1 → XP_056900496.1  toll-like receptor 18

    UniProtKB/TrEMBL
    A0A5C6PLR6
    Related
    ENSTFLP00005027719.1, ENSTFLT00005028873.1

  2. XM_057044513.1 → XP_056900493.1  toll-like receptor 18

    UniProtKB/TrEMBL
    A0A5C6PLR6

  3. XM_057044515.1 → XP_056900495.1  toll-like receptor 18

    UniProtKB/TrEMBL
    A0A5C6PLR6

  4. XM_057044514.1 → XP_056900494.1  toll-like receptor 18

    UniProtKB/TrEMBL
    A0A5C6PLR6
Nucleotide Protein
Heading Accession and Version

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