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pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) [ Takifugu flavidus (sansaifugu) ]

Gene ID: 130528274, updated on 27-Mar-2024

Summary

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Gene symbol
pomgnt1
Gene description
protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
See related
EnsemblRapid:ENSTFLG00005002511
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu flavidus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See pomgnt1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM371156v2 (GCF_003711565.1) 7 NC_079526.1 (16226444..16234702, complement)

Chromosome 7 - NC_079526.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene tetraspanin-1 Neighboring gene interferon-induced protein with tetratricopeptide repeats 2-like Neighboring gene glutathione peroxidase 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079526.1 Chromosome 7 Reference ASM371156v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_003711565.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM371156v2 Primary Assembly

Genomic

  1. NC_079526.1 Reference ASM371156v2 Primary Assembly

    Range
    16226444..16234702 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057037436.1 → XP_056893416.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

    Related
    ENSTFLP00005003604.1, ENSTFLT00005004178.1
Nucleotide Protein
Heading Accession and Version

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