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tab1 TGF-beta activated kinase 1/MAP3K7 binding protein 1 [ Takifugu flavidus (sansaifugu) ]

Gene ID: 130527758, updated on 27-Mar-2024

Summary

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Gene symbol
tab1
Gene description
TGF-beta activated kinase 1/MAP3K7 binding protein 1
Locus tag
D4764_06G0005420
See related
EnsemblRapid:ENSTFLG00005013369
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu flavidus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Orthologs
human zebrafish all
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Genomic context

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See tab1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_06 current ASM371156v2 (GCF_003711565.1) 6 NC_079525.1 (6704344..6715813, complement)

Chromosome 6 - NC_079525.1Genomic Context describing neighboring genes Neighboring gene C1q and TNF related 6b Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase b Neighboring gene uncharacterized LOC130527763 Neighboring gene synaptogyrin-1-like Neighboring gene intraflagellar transport 27 homolog (Chlamydomonas)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_079525.1 Chromosome 6 Reference ASM371156v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_003711565.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM371156v2 Primary Assembly

Genomic

  1. NC_079525.1 Reference ASM371156v2 Primary Assembly

    Range
    6704344..6715813 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057036489.1 → XP_056892469.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X2

    Related
    ENSTFLP00005026877.1, ENSTFLT00005027931.1

  2. XM_057036487.1 → XP_056892467.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X1

    Related
    ENSTFLP00005026876.1, ENSTFLT00005027930.1

  3. XM_057036490.1 → XP_056892470.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 isoform X3

Nucleotide Protein
Heading Accession and Version

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